Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pde6bP23440 Gm1335-201ENSMUST00000121653 386 ntBASIC14.54□□□□□ -0.08
Pde6bP23440 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Gm4271-201ENSMUST00000174444 973 ntBASIC14.54□□□□□ -0.08
Pde6bP23440 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.54□□□□□ -0.08
Pde6bP23440 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.54□□□□□ -0.08
Pde6bP23440 Gm45880-201ENSMUST00000213041 853 ntBASIC14.54□□□□□ -0.08
Pde6bP23440 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Pde6bP23440 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Pde6bP23440 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Pde6bP23440 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pde6bP23440 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pde6bP23440 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.53□□□□□ -0.08
Pde6bP23440 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.53□□□□□ -0.08
Pde6bP23440 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.53□□□□□ -0.08
Pde6bP23440 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.53□□□□□ -0.08
Pde6bP23440 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.53□□□□□ -0.08
Pde6bP23440 Gm12403-201ENSMUST00000121384 959 ntBASIC14.53□□□□□ -0.08
Pde6bP23440 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.53□□□□□ -0.08
Pde6bP23440 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.53□□□□□ -0.08
Pde6bP23440 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.53□□□□□ -0.08
Pde6bP23440 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.53□□□□□ -0.08
Pde6bP23440 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.53□□□□□ -0.08
Pde6bP23440 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.53□□□□□ -0.08
Pde6bP23440 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.53□□□□□ -0.08
Pde6bP23440 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pde6bP23440 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pde6bP23440 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
Pde6bP23440 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.53□□□□□ -0.08
Pde6bP23440 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.53□□□□□ -0.08
Pde6bP23440 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pde6bP23440 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6bP23440 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6bP23440 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6bP23440 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6bP23440 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6bP23440 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6bP23440 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6bP23440 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6bP23440 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6bP23440 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pde6bP23440 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pde6bP23440 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pde6bP23440 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pde6bP23440 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pde6bP23440 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pde6bP23440 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pde6bP23440 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pde6bP23440 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms