Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.87□□□□□ -0.35
Fv4P11370 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Fv4P11370 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Fv4P11370 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Fv4P11370 Gm24694-201ENSMUST00000180054 110 ntBASIC12.87□□□□□ -0.35
Fv4P11370 Gm27663-201ENSMUST00000184839 110 ntBASIC12.87□□□□□ -0.35
Fv4P11370 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.87□□□□□ -0.35
Fv4P11370 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fv4P11370 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.87□□□□□ -0.35
Fv4P11370 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.87□□□□□ -0.35
Fv4P11370 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fv4P11370 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.87□□□□□ -0.35
Fv4P11370 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.87□□□□□ -0.35
Fv4P11370 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Fv4P11370 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fv4P11370 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fv4P11370 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.87□□□□□ -0.35
Fv4P11370 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fv4P11370 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Fv4P11370 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fv4P11370 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Fv4P11370 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Fv4P11370 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Fv4P11370 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fv4P11370 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Fv4P11370 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Fv4P11370 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fv4P11370 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Fv4P11370 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Fv4P11370 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Fv4P11370 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Fv4P11370 Gm12151-201ENSMUST00000121374 290 ntBASIC12.86□□□□□ -0.35
Fv4P11370 Gm14719-201ENSMUST00000121891 340 ntBASIC12.86□□□□□ -0.35
Fv4P11370 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.86□□□□□ -0.35
Fv4P11370 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Fv4P11370 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.86□□□□□ -0.35
Fv4P11370 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.86□□□□□ -0.35
Fv4P11370 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Fv4P11370 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.86□□□□□ -0.35
Fv4P11370 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.86□□□□□ -0.35
Fv4P11370 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Fv4P11370 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.86□□□□□ -0.35
Fv4P11370 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Fv4P11370 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Fv4P11370 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Fv4P11370 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Fv4P11370 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.85□□□□□ -0.35
Fv4P11370 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.85□□□□□ -0.35
Fv4P11370 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.85□□□□□ -0.35
Fv4P11370 Gm29608-201ENSMUST00000190444 463 ntBASIC12.85□□□□□ -0.35
Fv4P11370 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.85□□□□□ -0.35
Fv4P11370 Gm19931-201ENSMUST00000198920 368 ntBASIC12.85□□□□□ -0.35
Fv4P11370 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Fv4P11370 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.85□□□□□ -0.35
Fv4P11370 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.85□□□□□ -0.35
Fv4P11370 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Fv4P11370 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms