Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.48□□□□□ -0.41
Nid1P10493 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nid1P10493 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Nid1P10493 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.48□□□□□ -0.41
Nid1P10493 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.48□□□□□ -0.41
Nid1P10493 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Gm42550-201ENSMUST00000201553 960 ntBASIC12.48□□□□□ -0.41
Nid1P10493 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.48□□□□□ -0.41
Nid1P10493 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Nid1P10493 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nid1P10493 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nid1P10493 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.47□□□□□ -0.41
Nid1P10493 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nid1P10493 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nid1P10493 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.47□□□□□ -0.41
Nid1P10493 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.47□□□□□ -0.41
Nid1P10493 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nid1P10493 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nid1P10493 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nid1P10493 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nid1P10493 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nid1P10493 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Nid1P10493 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nid1P10493 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nid1P10493 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Nid1P10493 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nid1P10493 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.47□□□□□ -0.41
Nid1P10493 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.47□□□□□ -0.41
Nid1P10493 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.47□□□□□ -0.41
Nid1P10493 Gm38223-201ENSMUST00000194484 695 ntBASIC12.47□□□□□ -0.41
Nid1P10493 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.47□□□□□ -0.41
Nid1P10493 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.47□□□□□ -0.41
Nid1P10493 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nid1P10493 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Nid1P10493 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nid1P10493 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nid1P10493 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nid1P10493 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Nid1P10493 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nid1P10493 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nid1P10493 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.47□□□□□ -0.41
Nid1P10493 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.47□□□□□ -0.41
Nid1P10493 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nid1P10493 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Nid1P10493 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nid1P10493 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nid1P10493 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nid1P10493 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nid1P10493 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.46□□□□□ -0.41
Nid1P10493 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
Nid1P10493 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nid1P10493 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nid1P10493 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nid1P10493 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Nid1P10493 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nid1P10493 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nid1P10493 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nid1P10493 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nid1P10493 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nid1P10493 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nid1P10493 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nid1P10493 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nid1P10493 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nid1P10493 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nid1P10493 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nid1P10493 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.46□□□□□ -0.41
Nid1P10493 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nid1P10493 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nid1P10493 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.46□□□□□ -0.41
Nid1P10493 Gm26315-201ENSMUST00000083890 321 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms