Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.09□□□□□ -0.15
TnfP06804 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnfP06804 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TnfP06804 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TnfP06804 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.08□□□□□ -0.15
TnfP06804 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.08□□□□□ -0.16
TnfP06804 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
TnfP06804 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
TnfP06804 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.08□□□□□ -0.16
TnfP06804 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.08□□□□□ -0.16
TnfP06804 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Gm19309-201ENSMUST00000218295 205 ntBASIC14.08□□□□□ -0.16
TnfP06804 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TnfP06804 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TnfP06804 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.08□□□□□ -0.16
TnfP06804 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TnfP06804 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TnfP06804 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
TnfP06804 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.08□□□□□ -0.16
TnfP06804 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.08□□□□□ -0.16
TnfP06804 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TnfP06804 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.07□□□□□ -0.16
TnfP06804 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.07□□□□□ -0.16
TnfP06804 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.07□□□□□ -0.16
TnfP06804 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.07□□□□□ -0.16
TnfP06804 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.07□□□□□ -0.16
TnfP06804 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.07□□□□□ -0.16
TnfP06804 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.07□□□□□ -0.16
TnfP06804 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TnfP06804 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TnfP06804 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TnfP06804 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.07□□□□□ -0.16
TnfP06804 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnfP06804 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TnfP06804 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TnfP06804 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
TnfP06804 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.06□□□□□ -0.16
TnfP06804 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TnfP06804 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.06□□□□□ -0.16
TnfP06804 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.06□□□□□ -0.16
TnfP06804 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.06□□□□□ -0.16
TnfP06804 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.06□□□□□ -0.16
TnfP06804 Gm26185-201ENSMUST00000157692 266 ntBASIC14.06□□□□□ -0.16
TnfP06804 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.06□□□□□ -0.16
TnfP06804 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TnfP06804 Gm28693-202ENSMUST00000190758 331 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms