Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a1P02463 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a1P02463 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a1P02463 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a1P02463 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a1P02463 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a1P02463 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col4a1P02463 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a1P02463 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a1P02463 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col4a1P02463 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.03■□□□□ 0.16
Col4a1P02463 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a1P02463 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a1P02463 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col4a1P02463 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col4a1P02463 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col4a1P02463 Gm6992-201ENSMUST00000217973 1607 ntBASIC16.02■□□□□ 0.16
Col4a1P02463 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Col4a1P02463 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col4a1P02463 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col4a1P02463 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Col4a1P02463 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col4a1P02463 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Col4a1P02463 Gm11930-201ENSMUST00000117788 190 ntBASIC16.02■□□□□ 0.16
Col4a1P02463 Gm19931-201ENSMUST00000198920 368 ntBASIC16.02■□□□□ 0.16
Col4a1P02463 Gm10702-201ENSMUST00000098929 1268 ntBASIC16.02■□□□□ 0.16
Col4a1P02463 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col4a1P02463 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col4a1P02463 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col4a1P02463 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col4a1P02463 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col4a1P02463 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Col4a1P02463 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col4a1P02463 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col4a1P02463 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC16.02■□□□□ 0.16
Col4a1P02463 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col4a1P02463 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col4a1P02463 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Col4a1P02463 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Col4a1P02463 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col4a1P02463 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col4a1P02463 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col4a1P02463 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col4a1P02463 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Col4a1P02463 Gm13315-201ENSMUST00000120376 991 ntBASIC16.02■□□□□ 0.15
Col4a1P02463 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col4a1P02463 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col4a1P02463 Gm24749-201ENSMUST00000157838 343 ntBASIC16.02■□□□□ 0.15
Col4a1P02463 Gm37666-201ENSMUST00000194110 866 ntBASIC16.02■□□□□ 0.15
Col4a1P02463 Gm44405-201ENSMUST00000198952 126 ntBASIC16.02■□□□□ 0.15
Col4a1P02463 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col4a1P02463 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Col4a1P02463 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col4a1P02463 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col4a1P02463 Gm8617-201ENSMUST00000118796 2222 ntBASIC16.01■□□□□ 0.15
Col4a1P02463 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Col4a1P02463 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col4a1P02463 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col4a1P02463 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col4a1P02463 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col4a1P02463 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Col4a1P02463 Gm5884-201ENSMUST00000036712 1479 ntBASIC16.01■□□□□ 0.15
Col4a1P02463 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC16.01■□□□□ 0.15
Col4a1P02463 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col4a1P02463 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC16.01■□□□□ 0.15
Col4a1P02463 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col4a1P02463 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC16.01■□□□□ 0.15
Col4a1P02463 Gm28450-201ENSMUST00000187349 638 ntBASIC16.01■□□□□ 0.15
Col4a1P02463 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col4a1P02463 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
Col4a1P02463 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Col4a1P02463 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col4a1P02463 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col4a1P02463 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col4a1P02463 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col4a1P02463 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col4a1P02463 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Col4a1P02463 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Col4a1P02463 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Col4a1P02463 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col4a1P02463 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col4a1P02463 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col4a1P02463 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col4a1P02463 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Col4a1P02463 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Col4a1P02463 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC16■□□□□ 0.15
Col4a1P02463 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC16■□□□□ 0.15
Col4a1P02463 Gm43138-201ENSMUST00000199123 708 ntBASIC16■□□□□ 0.15
Col4a1P02463 Gzmn-202ENSMUST00000225535 989 ntBASIC16■□□□□ 0.15
Col4a1P02463 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col4a1P02463 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col4a1P02463 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Col4a1P02463 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
Col4a1P02463 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col4a1P02463 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Col4a1P02463 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col4a1P02463 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Col4a1P02463 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16■□□□□ 0.15
Col4a1P02463 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col4a1P02463 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms