Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcn1O88704 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcn1O88704 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcn1O88704 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hcn1O88704 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcn1O88704 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Hcn1O88704 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hcn1O88704 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcn1O88704 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcn1O88704 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Hcn1O88704 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Hcn1O88704 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.76□□□□□ -0.37
Hcn1O88704 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Hcn1O88704 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Hcn1O88704 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Hcn1O88704 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Hcn1O88704 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.76□□□□□ -0.37
Hcn1O88704 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.76□□□□□ -0.37
Hcn1O88704 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.76□□□□□ -0.37
Hcn1O88704 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Hcn1O88704 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.76□□□□□ -0.37
Hcn1O88704 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Hcn1O88704 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.76□□□□□ -0.37
Hcn1O88704 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Hcn1O88704 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hcn1O88704 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Hcn1O88704 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.76□□□□□ -0.37
Hcn1O88704 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Hcn1O88704 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.75□□□□□ -0.37
Hcn1O88704 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.75□□□□□ -0.37
Hcn1O88704 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.75□□□□□ -0.37
Hcn1O88704 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.75□□□□□ -0.37
Hcn1O88704 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.75□□□□□ -0.37
Hcn1O88704 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 Gm5279-201ENSMUST00000199575 745 ntBASIC12.75□□□□□ -0.37
Hcn1O88704 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Hcn1O88704 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Hcn1O88704 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.75□□□□□ -0.37
Hcn1O88704 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 Gm19220-201ENSMUST00000222682 803 ntBASIC12.75□□□□□ -0.37
Hcn1O88704 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.75□□□□□ -0.37
Hcn1O88704 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hcn1O88704 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Hcn1O88704 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.74□□□□□ -0.37
Hcn1O88704 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Hcn1O88704 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Hcn1O88704 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hcn1O88704 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms