Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cops4O88544 Mir497b-201ENSMUST00000093601 125 ntBASIC12.28□□□□□ -0.44
Cops4O88544 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.28□□□□□ -0.44
Cops4O88544 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cops4O88544 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Cops4O88544 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cops4O88544 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.28□□□□□ -0.44
Cops4O88544 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cops4O88544 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cops4O88544 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cops4O88544 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Cops4O88544 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.27□□□□□ -0.44
Cops4O88544 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cops4O88544 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cops4O88544 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cops4O88544 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.27□□□□□ -0.44
Cops4O88544 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cops4O88544 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cops4O88544 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cops4O88544 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cops4O88544 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cops4O88544 Gm9719-201ENSMUST00000162765 543 ntBASIC12.27□□□□□ -0.45
Cops4O88544 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Cops4O88544 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.27□□□□□ -0.45
Cops4O88544 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cops4O88544 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.27□□□□□ -0.45
Cops4O88544 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.27□□□□□ -0.45
Cops4O88544 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.27□□□□□ -0.45
Cops4O88544 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops4O88544 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops4O88544 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops4O88544 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops4O88544 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cops4O88544 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.27□□□□□ -0.45
Cops4O88544 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.27□□□□□ -0.45
Cops4O88544 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cops4O88544 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops4O88544 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops4O88544 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cops4O88544 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops4O88544 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops4O88544 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cops4O88544 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cops4O88544 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Cops4O88544 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Cops4O88544 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.26□□□□□ -0.45
Cops4O88544 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.26□□□□□ -0.45
Cops4O88544 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.26□□□□□ -0.45
Cops4O88544 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.26□□□□□ -0.45
Cops4O88544 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.26□□□□□ -0.45
Cops4O88544 Gm18766-201ENSMUST00000189811 808 ntBASIC12.26□□□□□ -0.45
Cops4O88544 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cops4O88544 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.26□□□□□ -0.45
Cops4O88544 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Cops4O88544 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.26□□□□□ -0.45
Cops4O88544 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cops4O88544 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.25□□□□□ -0.45
Cops4O88544 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cops4O88544 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms