Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Ubr1O70481 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubr1O70481 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Ubr1O70481 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubr1O70481 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.93■□□□□ 0.3
Ubr1O70481 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubr1O70481 Gstp-ps-201ENSMUST00000195526 631 ntBASIC16.93■□□□□ 0.3
Ubr1O70481 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubr1O70481 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ubr1O70481 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ubr1O70481 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC16.93■□□□□ 0.3
Ubr1O70481 AC126444.1-201ENSMUST00000225938 1768 ntBASIC16.93■□□□□ 0.3
Ubr1O70481 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubr1O70481 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.93■□□□□ 0.3
Ubr1O70481 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ubr1O70481 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC16.93■□□□□ 0.3
Ubr1O70481 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubr1O70481 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubr1O70481 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubr1O70481 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ubr1O70481 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr1O70481 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr1O70481 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ubr1O70481 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr1O70481 Gm11930-201ENSMUST00000117788 190 ntBASIC16.92■□□□□ 0.3
Ubr1O70481 Gm12058-201ENSMUST00000118614 437 ntBASIC16.92■□□□□ 0.3
Ubr1O70481 Gm14921-201ENSMUST00000118643 908 ntBASIC16.92■□□□□ 0.3
Ubr1O70481 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC16.92■□□□□ 0.3
Ubr1O70481 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Ubr1O70481 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC16.92■□□□□ 0.3
Ubr1O70481 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr1O70481 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ubr1O70481 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC16.92■□□□□ 0.3
Ubr1O70481 Gm45925-201ENSMUST00000218882 744 ntBASIC16.92■□□□□ 0.3
Ubr1O70481 Gm10702-201ENSMUST00000098929 1268 ntBASIC16.92■□□□□ 0.3
Ubr1O70481 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr1O70481 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr1O70481 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr1O70481 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr1O70481 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr1O70481 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr1O70481 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr1O70481 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr1O70481 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC16.92■□□□□ 0.3
Ubr1O70481 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr1O70481 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.92■□□□□ 0.3
Ubr1O70481 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Ubr1O70481 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr1O70481 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr1O70481 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr1O70481 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ubr1O70481 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Ubr1O70481 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ubr1O70481 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC16.92■□□□□ 0.3
Ubr1O70481 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC16.92■□□□□ 0.3
Ubr1O70481 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC16.92■□□□□ 0.3
Ubr1O70481 Gm13394-201ENSMUST00000121658 1000 ntBASIC16.92■□□□□ 0.3
Ubr1O70481 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Ubr1O70481 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ubr1O70481 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ubr1O70481 Gm43138-201ENSMUST00000199123 708 ntBASIC16.92■□□□□ 0.3
Ubr1O70481 Nsd1-205ENSMUST00000224693 852 ntBASIC16.92■□□□□ 0.3
Ubr1O70481 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr1O70481 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr1O70481 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ubr1O70481 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr1O70481 Gm43908-201ENSMUST00000205074 1472 ntBASIC16.91■□□□□ 0.3
Ubr1O70481 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr1O70481 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr1O70481 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr1O70481 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC16.91■□□□□ 0.3
Ubr1O70481 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr1O70481 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr1O70481 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr1O70481 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ubr1O70481 Gm11597-201ENSMUST00000121423 964 ntBASIC16.91■□□□□ 0.3
Ubr1O70481 Gm6963-201ENSMUST00000147879 379 ntBASIC16.91■□□□□ 0.3
Ubr1O70481 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC16.91■□□□□ 0.3
Ubr1O70481 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
Ubr1O70481 Gm8494-201ENSMUST00000178171 1233 ntBASIC16.91■□□□□ 0.3
Ubr1O70481 Mir6979-201ENSMUST00000183927 56 ntBASIC16.91■□□□□ 0.3
Ubr1O70481 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC16.91■□□□□ 0.3
Ubr1O70481 Rprl1-202ENSMUST00000198476 238 ntBASIC16.91■□□□□ 0.3
Ubr1O70481 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr1O70481 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr1O70481 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr1O70481 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr1O70481 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr1O70481 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ubr1O70481 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr1O70481 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr1O70481 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr1O70481 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr1O70481 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ubr1O70481 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC16.9■□□□□ 0.3
Ubr1O70481 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr1O70481 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ubr1O70481 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Ubr1O70481 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC16.9■□□□□ 0.3
Ubr1O70481 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms