Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp8O70138 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp8O70138 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Mmp8O70138 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Mmp8O70138 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Mmp8O70138 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC16.19■□□□□ 0.18
Mmp8O70138 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Mmp8O70138 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.19■□□□□ 0.18
Mmp8O70138 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Mmp8O70138 Gm12203-201ENSMUST00000118235 598 ntBASIC16.19■□□□□ 0.18
Mmp8O70138 Gm12209-201ENSMUST00000120089 596 ntBASIC16.19■□□□□ 0.18
Mmp8O70138 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Mmp8O70138 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC16.19■□□□□ 0.18
Mmp8O70138 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.19■□□□□ 0.18
Mmp8O70138 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
Mmp8O70138 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Mmp8O70138 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Mmp8O70138 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Mmp8O70138 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.18■□□□□ 0.18
Mmp8O70138 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Mmp8O70138 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.18■□□□□ 0.18
Mmp8O70138 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Mmp8O70138 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 Gm6091-201ENSMUST00000098307 165 ntBASIC16.18■□□□□ 0.18
Mmp8O70138 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Mmp8O70138 Gm45684-201ENSMUST00000210244 1571 ntBASIC16.17■□□□□ 0.18
Mmp8O70138 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp8O70138 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp8O70138 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp8O70138 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp8O70138 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Mmp8O70138 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp8O70138 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp8O70138 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC16.17■□□□□ 0.18
Mmp8O70138 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.17■□□□□ 0.18
Mmp8O70138 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp8O70138 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC16.17■□□□□ 0.18
Mmp8O70138 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC16.17■□□□□ 0.18
Mmp8O70138 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC16.17■□□□□ 0.18
Mmp8O70138 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp8O70138 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp8O70138 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Mmp8O70138 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp8O70138 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp8O70138 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.17■□□□□ 0.18
Mmp8O70138 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Mmp8O70138 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp8O70138 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp8O70138 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Mmp8O70138 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp8O70138 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp8O70138 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp8O70138 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp8O70138 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp8O70138 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Mmp8O70138 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp8O70138 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp8O70138 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Mmp8O70138 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC16.16■□□□□ 0.18
Mmp8O70138 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp8O70138 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp8O70138 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Mmp8O70138 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms