Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Matn3O35701 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Matn3O35701 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Matn3O35701 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Matn3O35701 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Matn3O35701 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Matn3O35701 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.08□□□□□ -0.48
Matn3O35701 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Matn3O35701 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Matn3O35701 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Matn3O35701 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Matn3O35701 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.07□□□□□ -0.48
Matn3O35701 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Matn3O35701 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Matn3O35701 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Matn3O35701 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Matn3O35701 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Matn3O35701 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.07□□□□□ -0.48
Matn3O35701 Mir698-201ENSMUST00000102164 109 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Matn3O35701 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Matn3O35701 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Matn3O35701 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Matn3O35701 Auts2-212ENSMUST00000178555 309 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Matn3O35701 Gm29310-201ENSMUST00000185468 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm21825-201ENSMUST00000185728 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm29109-201ENSMUST00000185895 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm21896-201ENSMUST00000186520 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm21873-201ENSMUST00000186728 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm21794-201ENSMUST00000187056 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm21880-201ENSMUST00000187275 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm21826-201ENSMUST00000187451 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm21198-201ENSMUST00000188393 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm21749-201ENSMUST00000189343 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm21901-201ENSMUST00000189568 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm29424-201ENSMUST00000189716 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm28599-201ENSMUST00000189838 694 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm21867-201ENSMUST00000189917 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm29269-201ENSMUST00000190087 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm21722-201ENSMUST00000190153 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm28423-201ENSMUST00000190701 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm21899-201ENSMUST00000190745 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm21910-201ENSMUST00000191163 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm21849-201ENSMUST00000191571 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm28678-201ENSMUST00000191593 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm20910-201ENSMUST00000193268 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm21871-201ENSMUST00000194621 696 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Gm17968-201ENSMUST00000194902 784 ntBASIC12.07□□□□□ -0.48
Matn3O35701 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.07□□□□□ -0.48
Matn3O35701 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Matn3O35701 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.07□□□□□ -0.48
Matn3O35701 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Matn3O35701 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Matn3O35701 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Matn3O35701 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Matn3O35701 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Matn3O35701 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Matn3O35701 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Matn3O35701 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.07□□□□□ -0.48
Matn3O35701 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Matn3O35701 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Matn3O35701 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Matn3O35701 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Matn3O35701 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
Matn3O35701 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Matn3O35701 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Matn3O35701 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.06□□□□□ -0.48
Matn3O35701 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Matn3O35701 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Matn3O35701 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Matn3O35701 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Matn3O35701 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Matn3O35701 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Matn3O35701 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Matn3O35701 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Matn3O35701 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Matn3O35701 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Matn3O35701 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Matn3O35701 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Matn3O35701 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Matn3O35701 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Matn3O35701 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Matn3O35701 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.06□□□□□ -0.48
Matn3O35701 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Matn3O35701 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms