Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Efnb3O35393 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Efnb3O35393 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Efnb3O35393 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Efnb3O35393 Gm5566-201ENSMUST00000116118 459 ntBASIC10.53□□□□□ -0.72
Efnb3O35393 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Efnb3O35393 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.53□□□□□ -0.72
Efnb3O35393 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Efnb3O35393 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Efnb3O35393 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Efnb3O35393 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.53□□□□□ -0.72
Efnb3O35393 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.53□□□□□ -0.72
Efnb3O35393 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Efnb3O35393 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Efnb3O35393 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Efnb3O35393 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Efnb3O35393 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Efnb3O35393 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Efnb3O35393 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Efnb3O35393 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.52□□□□□ -0.73
Efnb3O35393 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Efnb3O35393 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.52□□□□□ -0.73
Efnb3O35393 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC10.52□□□□□ -0.73
Efnb3O35393 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.52□□□□□ -0.73
Efnb3O35393 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC10.52□□□□□ -0.73
Efnb3O35393 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Gm9719-201ENSMUST00000162765 543 ntBASIC10.52□□□□□ -0.73
Efnb3O35393 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.52□□□□□ -0.73
Efnb3O35393 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.52□□□□□ -0.73
Efnb3O35393 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Dupd1-202ENSMUST00000224735 548 ntBASIC10.52□□□□□ -0.73
Efnb3O35393 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Efnb3O35393 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Efnb3O35393 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC10.52□□□□□ -0.73
Efnb3O35393 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Efnb3O35393 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.52□□□□□ -0.73
Efnb3O35393 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Efnb3O35393 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Efnb3O35393 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Efnb3O35393 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Efnb3O35393 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Efnb3O35393 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms