Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 AC122197.2-201ENSMUST00000219196 1635 ntBASIC20.07■□□□□ 0.8
Polr1aO35134 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC20.07■□□□□ 0.8
Polr1aO35134 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Polr1aO35134 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Polr1aO35134 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Polr1aO35134 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC20.07■□□□□ 0.8
Polr1aO35134 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC20.07■□□□□ 0.8
Polr1aO35134 Gm45598-202ENSMUST00000210719 986 ntBASIC20.07■□□□□ 0.8
Polr1aO35134 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC20.07■□□□□ 0.8
Polr1aO35134 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Polr1aO35134 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Polr1aO35134 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Polr1aO35134 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Polr1aO35134 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Polr1aO35134 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Polr1aO35134 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Polr1aO35134 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Polr1aO35134 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC20.06■□□□□ 0.8
Polr1aO35134 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Polr1aO35134 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Polr1aO35134 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Polr1aO35134 Gm12286-201ENSMUST00000119246 1002 ntBASIC20.06■□□□□ 0.8
Polr1aO35134 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC20.06■□□□□ 0.8
Polr1aO35134 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Polr1aO35134 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC20.06■□□□□ 0.8
Polr1aO35134 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC20.06■□□□□ 0.8
Polr1aO35134 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC20.06■□□□□ 0.8
Polr1aO35134 Gm45433-201ENSMUST00000209386 247 ntBASIC20.06■□□□□ 0.8
Polr1aO35134 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Polr1aO35134 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Polr1aO35134 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Polr1aO35134 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Polr1aO35134 Sybu-209ENSMUST00000228639 4113 ntBASIC20.06■□□□□ 0.8
Polr1aO35134 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Polr1aO35134 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Polr1aO35134 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Polr1aO35134 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Polr1aO35134 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Polr1aO35134 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Polr1aO35134 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Polr1aO35134 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Polr1aO35134 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC20.05■□□□□ 0.8
Polr1aO35134 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Polr1aO35134 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC20.05■□□□□ 0.8
Polr1aO35134 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Polr1aO35134 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC20.05■□□□□ 0.8
Polr1aO35134 AC154680.1-201ENSMUST00000224376 859 ntBASIC20.05■□□□□ 0.8
Polr1aO35134 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Polr1aO35134 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Polr1aO35134 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
Polr1aO35134 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Polr1aO35134 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Polr1aO35134 Gm5989-201ENSMUST00000096092 2077 ntBASIC20.05■□□□□ 0.8
Polr1aO35134 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Polr1aO35134 Gm12380-201ENSMUST00000119012 544 ntBASIC20.05■□□□□ 0.8
Polr1aO35134 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Polr1aO35134 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC20.05■□□□□ 0.8
Polr1aO35134 Gm17040-202ENSMUST00000170597 889 ntBASIC20.05■□□□□ 0.8
Polr1aO35134 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Polr1aO35134 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC20.05■□□□□ 0.8
Polr1aO35134 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Polr1aO35134 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Polr1aO35134 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Polr1aO35134 Gm5884-201ENSMUST00000036712 1479 ntBASIC20.04■□□□□ 0.8
Polr1aO35134 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Polr1aO35134 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Polr1aO35134 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Polr1aO35134 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Polr1aO35134 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Polr1aO35134 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Polr1aO35134 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Polr1aO35134 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC20.04■□□□□ 0.8
Polr1aO35134 Gm17812-201ENSMUST00000204935 318 ntBASIC20.04■□□□□ 0.8
Polr1aO35134 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Polr1aO35134 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Polr1aO35134 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Polr1aO35134 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Polr1aO35134 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Polr1aO35134 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Polr1aO35134 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Polr1aO35134 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC20.03■□□□□ 0.8
Polr1aO35134 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Polr1aO35134 Gm37736-201ENSMUST00000193564 2802 ntBASIC20.03■□□□□ 0.8
Polr1aO35134 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Polr1aO35134 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Polr1aO35134 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Polr1aO35134 Gm18730-201ENSMUST00000218038 343 ntBASIC20.03■□□□□ 0.8
Polr1aO35134 AC166344.1-202ENSMUST00000224139 234 ntBASIC20.03■□□□□ 0.8
Polr1aO35134 Dhrs4-202ENSMUST00000226168 828 ntBASIC20.03■□□□□ 0.8
Polr1aO35134 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Polr1aO35134 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Polr1aO35134 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Polr1aO35134 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Polr1aO35134 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Polr1aO35134 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Polr1aO35134 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Polr1aO35134 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Polr1aO35134 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Polr1aO35134 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Polr1aO35134 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms