Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trove2O08848 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.69□□□□□ -0.22
Trove2O08848 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Trove2O08848 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trove2O08848 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trove2O08848 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trove2O08848 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.68□□□□□ -0.22
Trove2O08848 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trove2O08848 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Trove2O08848 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.68□□□□□ -0.22
Trove2O08848 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.68□□□□□ -0.22
Trove2O08848 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Trove2O08848 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trove2O08848 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.68□□□□□ -0.22
Trove2O08848 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.68□□□□□ -0.22
Trove2O08848 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.68□□□□□ -0.22
Trove2O08848 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Trove2O08848 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Trove2O08848 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.68□□□□□ -0.22
Trove2O08848 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trove2O08848 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trove2O08848 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trove2O08848 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.68□□□□□ -0.22
Trove2O08848 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trove2O08848 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.67□□□□□ -0.22
Trove2O08848 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trove2O08848 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trove2O08848 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 Gm24543-201ENSMUST00000103867 82 ntBASIC13.67□□□□□ -0.22
Trove2O08848 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 Gm27430-201ENSMUST00000184585 107 ntBASIC13.67□□□□□ -0.22
Trove2O08848 Gm44333-201ENSMUST00000197168 107 ntBASIC13.67□□□□□ -0.22
Trove2O08848 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 Dupd1-202ENSMUST00000224735 548 ntBASIC13.67□□□□□ -0.22
Trove2O08848 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trove2O08848 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trove2O08848 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trove2O08848 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trove2O08848 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Trove2O08848 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trove2O08848 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.67□□□□□ -0.22
Trove2O08848 Syt7-205ENSMUST00000224135 1557 ntBASIC13.66□□□□□ -0.22
Trove2O08848 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trove2O08848 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trove2O08848 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trove2O08848 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trove2O08848 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trove2O08848 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trove2O08848 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.66□□□□□ -0.22
Trove2O08848 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trove2O08848 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trove2O08848 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trove2O08848 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trove2O08848 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trove2O08848 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trove2O08848 Gm15693-201ENSMUST00000120470 637 ntBASIC13.66□□□□□ -0.22
Trove2O08848 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trove2O08848 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trove2O08848 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms