Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.84□□□□□ -0.19
Ebf3O08791 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ebf3O08791 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ebf3O08791 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.84□□□□□ -0.19
Ebf3O08791 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf3O08791 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ebf3O08791 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ebf3O08791 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ebf3O08791 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.83□□□□□ -0.19
Ebf3O08791 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ebf3O08791 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ebf3O08791 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.83□□□□□ -0.2
Ebf3O08791 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.83□□□□□ -0.2
Ebf3O08791 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Gm18054-201ENSMUST00000207539 555 ntBASIC13.83□□□□□ -0.2
Ebf3O08791 Gm6013-201ENSMUST00000212264 699 ntBASIC13.83□□□□□ -0.2
Ebf3O08791 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.83□□□□□ -0.2
Ebf3O08791 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Ebf3O08791 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Ebf3O08791 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf3O08791 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ebf3O08791 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ebf3O08791 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.82□□□□□ -0.2
Ebf3O08791 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ebf3O08791 Gm1335-201ENSMUST00000121653 386 ntBASIC13.82□□□□□ -0.2
Ebf3O08791 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Ebf3O08791 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.82□□□□□ -0.2
Ebf3O08791 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.82□□□□□ -0.2
Ebf3O08791 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.82□□□□□ -0.2
Ebf3O08791 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.82□□□□□ -0.2
Ebf3O08791 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Ebf3O08791 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.82□□□□□ -0.2
Ebf3O08791 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.82□□□□□ -0.2
Ebf3O08791 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Gm17330-201ENSMUST00000221047 165 ntBASIC13.82□□□□□ -0.2
Ebf3O08791 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.82□□□□□ -0.2
Ebf3O08791 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.82□□□□□ -0.2
Ebf3O08791 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Ebf3O08791 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.82□□□□□ -0.2
Ebf3O08791 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf3O08791 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.82□□□□□ -0.2
Ebf3O08791 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf3O08791 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf3O08791 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf3O08791 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ebf3O08791 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ebf3O08791 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms