Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Shisa8J3QNX5 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Gm15467-201ENSMUST00000120582 445 ntBASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shisa8J3QNX5 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Gm24543-201ENSMUST00000103867 82 ntBASIC12.11□□□□□ -0.47
Shisa8J3QNX5 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Mir6990-201ENSMUST00000183724 91 ntBASIC12.11□□□□□ -0.47
Shisa8J3QNX5 AW822252-206ENSMUST00000208904 237 ntBASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shisa8J3QNX5 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Shisa8J3QNX5 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms