Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.08□□□□□ -0.32
Cdr1E9Q0B4 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.08□□□□□ -0.32
Cdr1E9Q0B4 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdr1E9Q0B4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdr1E9Q0B4 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdr1E9Q0B4 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdr1E9Q0B4 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdr1E9Q0B4 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdr1E9Q0B4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cdr1E9Q0B4 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdr1E9Q0B4 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cdr1E9Q0B4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdr1E9Q0B4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdr1E9Q0B4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdr1E9Q0B4 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdr1E9Q0B4 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdr1E9Q0B4 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdr1E9Q0B4 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdr1E9Q0B4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm27459-201ENSMUST00000184860 107 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm29310-201ENSMUST00000185468 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm21825-201ENSMUST00000185728 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm29109-201ENSMUST00000185895 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm21896-201ENSMUST00000186520 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm21873-201ENSMUST00000186728 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm21794-201ENSMUST00000187056 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm21880-201ENSMUST00000187275 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm21826-201ENSMUST00000187451 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm21198-201ENSMUST00000188393 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm21749-201ENSMUST00000189343 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm21901-201ENSMUST00000189568 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm29424-201ENSMUST00000189716 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm28599-201ENSMUST00000189838 694 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm21867-201ENSMUST00000189917 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm29269-201ENSMUST00000190087 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm21722-201ENSMUST00000190153 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm28423-201ENSMUST00000190701 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm21899-201ENSMUST00000190745 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm21910-201ENSMUST00000191163 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm21849-201ENSMUST00000191571 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm28678-201ENSMUST00000191593 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm20910-201ENSMUST00000193268 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm21871-201ENSMUST00000194621 696 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm10060-201ENSMUST00000212002 111 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Birc2-201ENSMUST00000054878 378 ntBASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdr1E9Q0B4 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.06□□□□□ -0.32
Cdr1E9Q0B4 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 143.2 ms