Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd6A3KFM7 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.66□□□□□ -0.7
Chd6A3KFM7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.66□□□□□ -0.7
Chd6A3KFM7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd6A3KFM7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd6A3KFM7 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd6A3KFM7 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Chd6A3KFM7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd6A3KFM7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd6A3KFM7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd6A3KFM7 Gm9166-201ENSMUST00000120293 561 ntBASIC10.66□□□□□ -0.7
Chd6A3KFM7 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd6A3KFM7 Mir1956-201ENSMUST00000157748 65 ntBASIC10.66□□□□□ -0.7
Chd6A3KFM7 Gm18201-201ENSMUST00000174735 875 ntBASIC10.66□□□□□ -0.7
Chd6A3KFM7 Gm22121-201ENSMUST00000175148 54 ntBASIC10.66□□□□□ -0.7
Chd6A3KFM7 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd6A3KFM7 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Chd6A3KFM7 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.66□□□□□ -0.7
Chd6A3KFM7 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.66□□□□□ -0.7
Chd6A3KFM7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd6A3KFM7 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd6A3KFM7 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd6A3KFM7 Gm13384-201ENSMUST00000117166 1344 ntBASIC10.66□□□□□ -0.7
Chd6A3KFM7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd6A3KFM7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Chd6A3KFM7 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC10.66□□□□□ -0.7
Chd6A3KFM7 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Chd6A3KFM7 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Gm13875-201ENSMUST00000120162 282 ntBASIC10.65□□□□□ -0.7
Chd6A3KFM7 Gm12502-201ENSMUST00000120197 444 ntBASIC10.65□□□□□ -0.7
Chd6A3KFM7 Gm13182-201ENSMUST00000122241 312 ntBASIC10.65□□□□□ -0.7
Chd6A3KFM7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Gm7985-201ENSMUST00000183329 981 ntBASIC10.65□□□□□ -0.7
Chd6A3KFM7 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Ap3s1-202ENSMUST00000224622 978 ntBASIC10.65□□□□□ -0.7
Chd6A3KFM7 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.65□□□□□ -0.7
Chd6A3KFM7 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Gm43509-201ENSMUST00000196551 2594 ntBASIC10.65□□□□□ -0.7
Chd6A3KFM7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Gm11783-201ENSMUST00000119549 885 ntBASIC10.65□□□□□ -0.7
Chd6A3KFM7 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Gm6644-201ENSMUST00000186507 951 ntBASIC10.65□□□□□ -0.7
Chd6A3KFM7 Gm10774-201ENSMUST00000188689 204 ntBASIC10.65□□□□□ -0.7
Chd6A3KFM7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.65□□□□□ -0.7
Chd6A3KFM7 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Chd6A3KFM7 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Chd6A3KFM7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Chd6A3KFM7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Chd6A3KFM7 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Chd6A3KFM7 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.64□□□□□ -0.71
Chd6A3KFM7 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC10.64□□□□□ -0.71
Chd6A3KFM7 Gm25043-201ENSMUST00000158604 212 ntBASIC10.64□□□□□ -0.71
Chd6A3KFM7 Olfr692-202ENSMUST00000217827 1126 ntBASIC10.64□□□□□ -0.71
Chd6A3KFM7 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC10.64□□□□□ -0.71
Chd6A3KFM7 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Chd6A3KFM7 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Chd6A3KFM7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Chd6A3KFM7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Chd6A3KFM7 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Chd6A3KFM7 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.64□□□□□ -0.71
Chd6A3KFM7 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Chd6A3KFM7 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Chd6A3KFM7 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Chd6A3KFM7 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.64□□□□□ -0.71
Chd6A3KFM7 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Chd6A3KFM7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Chd6A3KFM7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Chd6A3KFM7 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Chd6A3KFM7 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.64□□□□□ -0.71
Chd6A3KFM7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.64□□□□□ -0.71
Chd6A3KFM7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms