Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Scn1aA2APX8 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.87□□□□□ -0.19
Scn1aA2APX8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Gm3890-201ENSMUST00000182416 207 ntBASIC13.87□□□□□ -0.19
Scn1aA2APX8 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1aA2APX8 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Scn1aA2APX8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.86□□□□□ -0.19
Scn1aA2APX8 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Gm25261-201ENSMUST00000157416 134 ntBASIC13.86□□□□□ -0.19
Scn1aA2APX8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.86□□□□□ -0.19
Scn1aA2APX8 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.86□□□□□ -0.19
Scn1aA2APX8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Gm12291-201ENSMUST00000121627 311 ntBASIC13.86□□□□□ -0.19
Scn1aA2APX8 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.86□□□□□ -0.19
Scn1aA2APX8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.86□□□□□ -0.19
Scn1aA2APX8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Scn1aA2APX8 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.86□□□□□ -0.19
Scn1aA2APX8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.85□□□□□ -0.19
Scn1aA2APX8 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Mir1938-201ENSMUST00000158746 100 ntBASIC13.85□□□□□ -0.19
Scn1aA2APX8 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.85□□□□□ -0.19
Scn1aA2APX8 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Scn1aA2APX8 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.85□□□□□ -0.19
Scn1aA2APX8 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.85□□□□□ -0.19
Scn1aA2APX8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1aA2APX8 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.85□□□□□ -0.19
Scn1aA2APX8 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Gm2231-201ENSMUST00000125661 612 ntBASIC13.85□□□□□ -0.19
Scn1aA2APX8 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scn1aA2APX8 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn1aA2APX8 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Scn1aA2APX8 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms