Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc112A0AUP1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc112A0AUP1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc112A0AUP1 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.22■□□□□ 0.03
Ccdc112A0AUP1 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc112A0AUP1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ccdc112A0AUP1 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 Gm27306-201ENSMUST00000183970 107 ntBASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ccdc112A0AUP1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc112A0AUP1 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc112A0AUP1 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ccdc112A0AUP1 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Ccdc112A0AUP1 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Gm9522-201ENSMUST00000182394 926 ntBASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ccdc112A0AUP1 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Gm12485-201ENSMUST00000119641 291 ntBASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Gm21854-201ENSMUST00000179901 471 ntBASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ccdc112A0AUP1 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms