Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Syt7-205ENSMUST00000224135 1557 ntBASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Gm8775-201ENSMUST00000170943 1327 ntBASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav8-1A0A075B641 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav8-1A0A075B641 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC9.52□□□□□ -0.88
Trav8-1A0A075B641 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav8-1A0A075B641 Gm38385-201ENSMUST00000194454 2351 ntBASIC9.52□□□□□ -0.88
Trav8-1A0A075B641 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav8-1A0A075B641 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Trav8-1A0A075B641 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav8-1A0A075B641 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.52□□□□□ -0.88
Trav8-1A0A075B641 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Gm4899-201ENSMUST00000178708 719 ntBASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav8-1A0A075B641 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Gm4782-201ENSMUST00000168705 2046 ntBASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Gm27459-201ENSMUST00000184860 107 ntBASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 AC158538.1-201ENSMUST00000225870 294 ntBASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Birc2-201ENSMUST00000054878 378 ntBASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC9.51□□□□□ -0.89
Trav8-1A0A075B641 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms