Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Mir7684-201ENSMUST00000183858 60 ntBASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Mir8102-201ENSMUST00000184148 139 ntBASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Gm17795-201ENSMUST00000214505 757 ntBASIC11.32□□□□□ -0.6
Gm3550W4VSN7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Gm3550W4VSN7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.31□□□□□ -0.6
Gm3550W4VSN7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Gm9522-201ENSMUST00000182394 926 ntBASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Gm27838-201ENSMUST00000184829 128 ntBASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gm3550W4VSN7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm3550W4VSN7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Gm3550W4VSN7 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm3550W4VSN7 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Gm3550W4VSN7 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm3550W4VSN7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm3550W4VSN7 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm3550W4VSN7 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm3550W4VSN7 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Gm3550W4VSN7 Gm15487-201ENSMUST00000122373 465 ntBASIC11.3□□□□□ -0.6
Gm3550W4VSN7 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gm3550W4VSN7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Gm3550W4VSN7 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gm3550W4VSN7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.3□□□□□ -0.6
Gm3550W4VSN7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms