Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk1bQ9Z2C6 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Upk1bQ9Z2C6 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Upk1bQ9Z2C6 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Upk1bQ9Z2C6 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Upk1bQ9Z2C6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Upk1bQ9Z2C6 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Upk1bQ9Z2C6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Upk1bQ9Z2C6 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Gm13365-201ENSMUST00000121188 973 ntBASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Mir1895-201ENSMUST00000122615 79 ntBASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk1bQ9Z2C6 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Upk1bQ9Z2C6 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms