Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cx3cr1Q9Z0D9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cx3cr1Q9Z0D9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Cx3cr1Q9Z0D9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cx3cr1Q9Z0D9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cx3cr1Q9Z0D9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cx3cr1Q9Z0D9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cx3cr1Q9Z0D9 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cx3cr1Q9Z0D9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cx3cr1Q9Z0D9 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cx3cr1Q9Z0D9 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cx3cr1Q9Z0D9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cx3cr1Q9Z0D9 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cx3cr1Q9Z0D9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cx3cr1Q9Z0D9 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm18889-201ENSMUST00000174284 929 ntBASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm4804-201ENSMUST00000182234 999 ntBASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
Cx3cr1Q9Z0D9 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm45841-201ENSMUST00000207700 164 ntBASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm5425-201ENSMUST00000214125 459 ntBASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Mzt1-203ENSMUST00000227948 952 ntBASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Cx3cr1Q9Z0D9 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cx3cr1Q9Z0D9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cx3cr1Q9Z0D9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.25□□□□□ -0.61
Cx3cr1Q9Z0D9 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cx3cr1Q9Z0D9 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cx3cr1Q9Z0D9 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms