Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Gm11425-201ENSMUST00000119608 498 ntBASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Gm15429-201ENSMUST00000151268 798 ntBASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Gm26464-201ENSMUST00000157094 305 ntBASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Gm37102-201ENSMUST00000195740 1105 ntBASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Gm9396-201ENSMUST00000076703 567 ntBASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rtp4Q9ER80 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Gm4984-201ENSMUST00000115987 360 ntBASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Gm13689-201ENSMUST00000119360 685 ntBASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Gm27839-201ENSMUST00000184242 106 ntBASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rtp4Q9ER80 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Mir1894-201ENSMUST00000122802 81 ntBASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Gm28196-201ENSMUST00000187719 640 ntBASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.49□□□□□ -0.41
Rtp4Q9ER80 Gm8463-201ENSMUST00000208573 613 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms