Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdc40Q9DC48 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Gm15770-201ENSMUST00000117498 584 ntBASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Gm11524-201ENSMUST00000119349 807 ntBASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Gm15429-201ENSMUST00000151268 798 ntBASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Gm6244-201ENSMUST00000178732 841 ntBASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdc40Q9DC48 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cdc40Q9DC48 Mir7085-201ENSMUST00000184353 66 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms