Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf6Q9DBU5 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf6Q9DBU5 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.3□□□□□ -0.12
Rnf6Q9DBU5 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf6Q9DBU5 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rnf6Q9DBU5 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf6Q9DBU5 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf6Q9DBU5 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf6Q9DBU5 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf6Q9DBU5 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rnf6Q9DBU5 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.3□□□□□ -0.12
Rnf6Q9DBU5 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf6Q9DBU5 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf6Q9DBU5 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf6Q9DBU5 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf6Q9DBU5 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnf6Q9DBU5 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.3□□□□□ -0.12
Rnf6Q9DBU5 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.3□□□□□ -0.12
Rnf6Q9DBU5 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Gm5687-201ENSMUST00000118252 640 ntBASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Gm27701-201ENSMUST00000184498 110 ntBASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Gm8515-201ENSMUST00000194852 576 ntBASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Itm2b-204ENSMUST00000228637 783 ntBASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnf6Q9DBU5 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Gm6447-201ENSMUST00000118905 835 ntBASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Gm19931-201ENSMUST00000198920 368 ntBASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnf6Q9DBU5 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms