Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.51■□□□□ 0.39
U2af1Q9D883 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
U2af1Q9D883 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.51■□□□□ 0.39
U2af1Q9D883 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
U2af1Q9D883 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC17.51■□□□□ 0.39
U2af1Q9D883 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
U2af1Q9D883 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
U2af1Q9D883 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
U2af1Q9D883 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
U2af1Q9D883 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
U2af1Q9D883 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
U2af1Q9D883 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
U2af1Q9D883 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
U2af1Q9D883 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Gm13226-201ENSMUST00000117838 404 ntBASIC17.5■□□□□ 0.39
U2af1Q9D883 Gm11618-201ENSMUST00000117946 267 ntBASIC17.5■□□□□ 0.39
U2af1Q9D883 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.5■□□□□ 0.39
U2af1Q9D883 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC17.5■□□□□ 0.39
U2af1Q9D883 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC17.5■□□□□ 0.39
U2af1Q9D883 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC17.5■□□□□ 0.39
U2af1Q9D883 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC17.5■□□□□ 0.39
U2af1Q9D883 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
U2af1Q9D883 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17.5■□□□□ 0.39
U2af1Q9D883 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
U2af1Q9D883 Gm16202-201ENSMUST00000117532 544 ntBASIC17.49■□□□□ 0.39
U2af1Q9D883 Gm16177-201ENSMUST00000120728 718 ntBASIC17.49■□□□□ 0.39
U2af1Q9D883 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC17.49■□□□□ 0.39
U2af1Q9D883 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC17.49■□□□□ 0.39
U2af1Q9D883 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC17.49■□□□□ 0.39
U2af1Q9D883 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
U2af1Q9D883 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC17.49■□□□□ 0.39
U2af1Q9D883 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
U2af1Q9D883 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC17.48■□□□□ 0.39
U2af1Q9D883 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
U2af1Q9D883 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
U2af1Q9D883 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
U2af1Q9D883 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
U2af1Q9D883 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
U2af1Q9D883 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC17.48■□□□□ 0.39
U2af1Q9D883 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
U2af1Q9D883 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
U2af1Q9D883 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.48■□□□□ 0.39
U2af1Q9D883 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
U2af1Q9D883 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
U2af1Q9D883 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
U2af1Q9D883 Gm27731-201ENSMUST00000185192 107 ntBASIC17.48■□□□□ 0.39
U2af1Q9D883 Gm37922-201ENSMUST00000195596 455 ntBASIC17.48■□□□□ 0.39
U2af1Q9D883 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC17.48■□□□□ 0.39
U2af1Q9D883 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
U2af1Q9D883 AC154595.3-201ENSMUST00000224579 384 ntBASIC17.48■□□□□ 0.39
U2af1Q9D883 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
U2af1Q9D883 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
U2af1Q9D883 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
U2af1Q9D883 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
U2af1Q9D883 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
U2af1Q9D883 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
U2af1Q9D883 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
U2af1Q9D883 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
U2af1Q9D883 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
U2af1Q9D883 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
U2af1Q9D883 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms