Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.15□□□□□ -0.14
Gm3404Q9D506 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.15□□□□□ -0.14
Gm3404Q9D506 Gm2495-201ENSMUST00000191160 466 ntBASIC14.15□□□□□ -0.14
Gm3404Q9D506 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3404Q9D506 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.15□□□□□ -0.14
Gm3404Q9D506 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.15□□□□□ -0.14
Gm3404Q9D506 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3404Q9D506 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3404Q9D506 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.15□□□□□ -0.14
Gm3404Q9D506 Gm26315-201ENSMUST00000083890 321 ntBASIC14.15□□□□□ -0.14
Gm3404Q9D506 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gm3404Q9D506 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.15□□□□□ -0.14
Gm3404Q9D506 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gm3404Q9D506 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3404Q9D506 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3404Q9D506 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gm3404Q9D506 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3404Q9D506 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3404Q9D506 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3404Q9D506 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gm3404Q9D506 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Gm3404Q9D506 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.14□□□□□ -0.15
Gm3404Q9D506 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Gm3404Q9D506 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Gm3404Q9D506 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Gm5745-201ENSMUST00000183748 313 ntBASIC14.14□□□□□ -0.15
Gm3404Q9D506 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.14□□□□□ -0.15
Gm3404Q9D506 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Gm3404Q9D506 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.13□□□□□ -0.15
Gm3404Q9D506 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.13□□□□□ -0.15
Gm3404Q9D506 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Gm11478-201ENSMUST00000117851 599 ntBASIC14.13□□□□□ -0.15
Gm3404Q9D506 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3404Q9D506 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.13□□□□□ -0.15
Gm3404Q9D506 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.13□□□□□ -0.15
Gm3404Q9D506 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.13□□□□□ -0.15
Gm3404Q9D506 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3404Q9D506 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Gm3404Q9D506 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.13□□□□□ -0.15
Gm3404Q9D506 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3404Q9D506 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3404Q9D506 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3404Q9D506 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3404Q9D506 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3404Q9D506 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.12□□□□□ -0.15
Gm3404Q9D506 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Gm3404Q9D506 Grk6-205ENSMUST00000224653 2976 ntBASIC14.12□□□□□ -0.15
Gm3404Q9D506 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Gm3404Q9D506 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms