Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mms19Q9D071 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mms19Q9D071 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mms19Q9D071 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mms19Q9D071 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Mms19Q9D071 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mms19Q9D071 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mms19Q9D071 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Mms19Q9D071 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mms19Q9D071 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.26□□□□□ -0.13
Mms19Q9D071 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mms19Q9D071 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Mms19Q9D071 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mms19Q9D071 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Mms19Q9D071 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mms19Q9D071 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.26□□□□□ -0.13
Mms19Q9D071 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.26□□□□□ -0.13
Mms19Q9D071 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.26□□□□□ -0.13
Mms19Q9D071 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Mms19Q9D071 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.26□□□□□ -0.13
Mms19Q9D071 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mms19Q9D071 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mms19Q9D071 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mms19Q9D071 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mms19Q9D071 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mms19Q9D071 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Mms19Q9D071 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Mms19Q9D071 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.26□□□□□ -0.13
Mms19Q9D071 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.26□□□□□ -0.13
Mms19Q9D071 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.26□□□□□ -0.13
Mms19Q9D071 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mms19Q9D071 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.26□□□□□ -0.13
Mms19Q9D071 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Mms19Q9D071 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mms19Q9D071 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Mms19Q9D071 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mms19Q9D071 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mms19Q9D071 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mms19Q9D071 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.26□□□□□ -0.13
Mms19Q9D071 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Mms19Q9D071 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mms19Q9D071 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mms19Q9D071 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mms19Q9D071 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mms19Q9D071 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mms19Q9D071 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mms19Q9D071 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mms19Q9D071 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mms19Q9D071 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Mms19Q9D071 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mms19Q9D071 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mms19Q9D071 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Mms19Q9D071 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mms19Q9D071 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mms19Q9D071 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mms19Q9D071 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mms19Q9D071 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.25□□□□□ -0.13
Mms19Q9D071 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.25□□□□□ -0.13
Mms19Q9D071 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mms19Q9D071 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.25□□□□□ -0.13
Mms19Q9D071 Gm8602-201ENSMUST00000184045 607 ntBASIC14.25□□□□□ -0.13
Mms19Q9D071 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.25□□□□□ -0.13
Mms19Q9D071 Gm25857-201ENSMUST00000082788 129 ntBASIC14.25□□□□□ -0.13
Mms19Q9D071 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Mms19Q9D071 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mms19Q9D071 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mms19Q9D071 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mms19Q9D071 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mms19Q9D071 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Mms19Q9D071 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Mms19Q9D071 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mms19Q9D071 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mms19Q9D071 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Mms19Q9D071 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mms19Q9D071 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.25□□□□□ -0.13
Mms19Q9D071 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mms19Q9D071 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mms19Q9D071 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mms19Q9D071 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.24□□□□□ -0.13
Mms19Q9D071 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.24□□□□□ -0.13
Mms19Q9D071 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mms19Q9D071 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mms19Q9D071 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mms19Q9D071 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.24□□□□□ -0.13
Mms19Q9D071 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mms19Q9D071 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.24□□□□□ -0.13
Mms19Q9D071 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.24□□□□□ -0.13
Mms19Q9D071 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Mms19Q9D071 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mms19Q9D071 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mms19Q9D071 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mms19Q9D071 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mms19Q9D071 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mms19Q9D071 Gm17150-201ENSMUST00000165577 381 ntBASIC14.24□□□□□ -0.13
Mms19Q9D071 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Mms19Q9D071 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mms19Q9D071 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.24□□□□□ -0.13
Mms19Q9D071 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Mms19Q9D071 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Mms19Q9D071 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms