Protein–RNA interactions for Protein: Q9CVD2

Atxn3, Ataxin-3, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn3Q9CVD2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atxn3Q9CVD2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Gm12203-201ENSMUST00000118235 598 ntBASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Gm12209-201ENSMUST00000120089 596 ntBASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Gm13123-201ENSMUST00000122173 492 ntBASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Gm11978-201ENSMUST00000122315 466 ntBASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Mir7221-201ENSMUST00000184009 72 ntBASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Gm44799-201ENSMUST00000207639 1202 ntBASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Gm45638-201ENSMUST00000211507 2878 ntBASIC17.1■□□□□ 0.33
Atxn3Q9CVD2 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Gm27486-201ENSMUST00000184923 80 ntBASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atxn3Q9CVD2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atxn3Q9CVD2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC17.08■□□□□ 0.33
Atxn3Q9CVD2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 Gm13369-201ENSMUST00000119442 987 ntBASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 Gm22331-201ENSMUST00000158066 136 ntBASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Atxn3Q9CVD2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms