Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Gm14057-201ENSMUST00000120631 482 ntBASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Gm20949-201ENSMUST00000206478 952 ntBASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lrrc40Q9CRC8 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Gm19220-201ENSMUST00000222682 803 ntBASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.24□□□□□ -0.29
Lrrc40Q9CRC8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Gm42612-201ENSMUST00000197986 623 ntBASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Gm43170-201ENSMUST00000199827 612 ntBASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Gm42550-201ENSMUST00000201553 960 ntBASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lrrc40Q9CRC8 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms