Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Mrpl54Q9CPW3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Gm7284-201ENSMUST00000131667 944 ntBASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Gm19931-201ENSMUST00000198920 368 ntBASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Mrpl54Q9CPW3 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Mrpl54Q9CPW3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.77□□□□□ -0.52
Mrpl54Q9CPW3 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Mrpl54Q9CPW3 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Mrpl54Q9CPW3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Mrpl54Q9CPW3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Mrpl54Q9CPW3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
Mrpl54Q9CPW3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.77□□□□□ -0.52
Mrpl54Q9CPW3 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.77□□□□□ -0.52
Mrpl54Q9CPW3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Mrpl54Q9CPW3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Mrpl54Q9CPW3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Mrpl54Q9CPW3 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Gm11543-201ENSMUST00000120758 370 ntBASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Mrpl54Q9CPW3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms