Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.28□□□□□ -0.28
Trim33Q99PP7 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.28□□□□□ -0.28
Trim33Q99PP7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim33Q99PP7 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim33Q99PP7 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Trim33Q99PP7 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Trim33Q99PP7 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim33Q99PP7 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim33Q99PP7 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim33Q99PP7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Trim33Q99PP7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.27□□□□□ -0.28
Trim33Q99PP7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim33Q99PP7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim33Q99PP7 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim33Q99PP7 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim33Q99PP7 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim33Q99PP7 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.27□□□□□ -0.28
Trim33Q99PP7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim33Q99PP7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Trim33Q99PP7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim33Q99PP7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim33Q99PP7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Gm26464-201ENSMUST00000157094 305 ntBASIC13.27□□□□□ -0.29
Trim33Q99PP7 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Gm18624-201ENSMUST00000220966 658 ntBASIC13.27□□□□□ -0.29
Trim33Q99PP7 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim33Q99PP7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.27□□□□□ -0.29
Trim33Q99PP7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim33Q99PP7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.26□□□□□ -0.29
Trim33Q99PP7 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim33Q99PP7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.26□□□□□ -0.29
Trim33Q99PP7 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim33Q99PP7 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.25□□□□□ -0.29
Trim33Q99PP7 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trim33Q99PP7 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms