Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm11978-201ENSMUST00000122315 466 ntBASIC16.36■□□□□ 0.21
Trim34aQ99PP6 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC16.36■□□□□ 0.21
Trim34aQ99PP6 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim34aQ99PP6 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim34aQ99PP6 Gm17208-201ENSMUST00000168388 535 ntBASIC16.36■□□□□ 0.21
Trim34aQ99PP6 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim34aQ99PP6 Ighv1-62-201ENSMUST00000193406 350 ntBASIC16.36■□□□□ 0.21
Trim34aQ99PP6 Gm21769-201ENSMUST00000211922 111 ntBASIC16.36■□□□□ 0.21
Trim34aQ99PP6 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trim34aQ99PP6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim34aQ99PP6 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim34aQ99PP6 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim34aQ99PP6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim34aQ99PP6 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim34aQ99PP6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim34aQ99PP6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim34aQ99PP6 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim34aQ99PP6 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim34aQ99PP6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Gm20482-202ENSMUST00000174729 825 ntBASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Gm29199-201ENSMUST00000187766 775 ntBASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Gm9176-201ENSMUST00000219955 1120 ntBASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim34aQ99PP6 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Morn2-202ENSMUST00000227729 656 ntBASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim34aQ99PP6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
Trim34aQ99PP6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim34aQ99PP6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Trim34aQ99PP6 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim34aQ99PP6 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim34aQ99PP6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim34aQ99PP6 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim34aQ99PP6 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.33■□□□□ 0.21
Trim34aQ99PP6 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC16.33■□□□□ 0.2
Trim34aQ99PP6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms