Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Gm6152-201ENSMUST00000151704 340 ntBASIC11.69□□□□□ -0.54
Scrt1Q99M85 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Gm24420-201ENSMUST00000176676 59 ntBASIC11.69□□□□□ -0.54
Scrt1Q99M85 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.69□□□□□ -0.54
Scrt1Q99M85 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.69□□□□□ -0.54
Scrt1Q99M85 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Gm18473-201ENSMUST00000220543 868 ntBASIC11.69□□□□□ -0.54
Scrt1Q99M85 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.69□□□□□ -0.54
Scrt1Q99M85 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scrt1Q99M85 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Mir877-201ENSMUST00000104738 85 ntBASIC11.68□□□□□ -0.54
Scrt1Q99M85 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Gm26083-201ENSMUST00000157904 193 ntBASIC11.68□□□□□ -0.54
Scrt1Q99M85 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Scrt1Q99M85 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Gm38341-201ENSMUST00000195357 515 ntBASIC11.68□□□□□ -0.54
Scrt1Q99M85 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Gm44608-201ENSMUST00000206827 855 ntBASIC11.68□□□□□ -0.54
Scrt1Q99M85 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.68□□□□□ -0.54
Scrt1Q99M85 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.68□□□□□ -0.54
Scrt1Q99M85 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scrt1Q99M85 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
Scrt1Q99M85 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.67□□□□□ -0.54
Scrt1Q99M85 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scrt1Q99M85 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms