Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Gm7730-201ENSMUST00000212486 454 ntBASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp1b1Q99LU0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Gm15770-201ENSMUST00000117498 584 ntBASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Gm14719-201ENSMUST00000121891 340 ntBASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Gm16215-201ENSMUST00000161990 637 ntBASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Grk6-205ENSMUST00000224653 2976 ntBASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.62□□□□□ -0.39
Chmp1b1Q99LU0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 Gm29667-201ENSMUST00000190817 490 ntBASIC12.61□□□□□ -0.39
Chmp1b1Q99LU0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms