Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfc4Q99J62 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfc4Q99J62 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfc4Q99J62 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfc4Q99J62 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rfc4Q99J62 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rfc4Q99J62 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Rfc4Q99J62 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfc4Q99J62 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rfc4Q99J62 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.3■□□□□ 0.04
Rfc4Q99J62 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rfc4Q99J62 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rfc4Q99J62 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rfc4Q99J62 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rfc4Q99J62 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.3■□□□□ 0.04
Rfc4Q99J62 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.3■□□□□ 0.04
Rfc4Q99J62 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfc4Q99J62 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfc4Q99J62 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Rfc4Q99J62 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfc4Q99J62 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rfc4Q99J62 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfc4Q99J62 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Rfc4Q99J62 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfc4Q99J62 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rfc4Q99J62 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfc4Q99J62 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.29■□□□□ 0.04
Rfc4Q99J62 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rfc4Q99J62 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.29■□□□□ 0.04
Rfc4Q99J62 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rfc4Q99J62 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.28■□□□□ 0.04
Rfc4Q99J62 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.28■□□□□ 0.04
Rfc4Q99J62 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rfc4Q99J62 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Gm12997-201ENSMUST00000120207 640 ntBASIC15.28■□□□□ 0.04
Rfc4Q99J62 Mir7070-201ENSMUST00000183657 86 ntBASIC15.28■□□□□ 0.04
Rfc4Q99J62 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Gm18584-201ENSMUST00000203098 964 ntBASIC15.28■□□□□ 0.04
Rfc4Q99J62 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Gm5781-201ENSMUST00000219792 443 ntBASIC15.28■□□□□ 0.04
Rfc4Q99J62 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.28■□□□□ 0.04
Rfc4Q99J62 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfc4Q99J62 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms