Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Gm44855-201ENSMUST00000205725 362 ntBASIC13□□□□□ -0.33
Pcdha8Q91Y12 Gm19078-201ENSMUST00000206311 727 ntBASIC13□□□□□ -0.33
Pcdha8Q91Y12 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13□□□□□ -0.33
Pcdha8Q91Y12 AC155258.1-201ENSMUST00000219303 253 ntBASIC13□□□□□ -0.33
Pcdha8Q91Y12 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Pcdha8Q91Y12 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Gm19220-201ENSMUST00000222682 803 ntBASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Gm5161-201ENSMUST00000075243 853 ntBASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Gm24447-201ENSMUST00000083977 338 ntBASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha8Q91Y12 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Gm26464-201ENSMUST00000157094 305 ntBASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Gm27437-201ENSMUST00000183429 107 ntBASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Gm6218-201ENSMUST00000219812 628 ntBASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Syt7-205ENSMUST00000224135 1557 ntBASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdha8Q91Y12 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdha8Q91Y12 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdha8Q91Y12 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdha8Q91Y12 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha8Q91Y12 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha8Q91Y12 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha8Q91Y12 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdha8Q91Y12 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha8Q91Y12 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha8Q91Y12 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Pcdha8Q91Y12 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha8Q91Y12 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdha8Q91Y12 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms