Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Gm16372-201ENSMUST00000073088 450 ntBASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Pcdha9Q91Y11 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Gm14350-201ENSMUST00000116642 640 ntBASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Gm11478-201ENSMUST00000117851 599 ntBASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.15□□□□□ -0.14
Pcdha9Q91Y11 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.15
Pcdha9Q91Y11 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdha9Q91Y11 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms