Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Gm9257-201ENSMUST00000221254 232 ntBASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb18Q91Y02 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Gm37497-201ENSMUST00000195830 798 ntBASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdhb18Q91Y02 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.92□□□□□ -0.18
Pcdhb18Q91Y02 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms