Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhb20Q91XZ9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhb20Q91XZ9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdhb20Q91XZ9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb20Q91XZ9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb20Q91XZ9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb20Q91XZ9 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb20Q91XZ9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb20Q91XZ9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdhb20Q91XZ9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdhb20Q91XZ9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Gm15530-201ENSMUST00000122206 555 ntBASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Gm27772-201ENSMUST00000184900 187 ntBASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Gm9517-201ENSMUST00000195021 874 ntBASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Gm18985-201ENSMUST00000196472 1079 ntBASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Gm45668-201ENSMUST00000211271 493 ntBASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdhb20Q91XZ9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Gm16149-201ENSMUST00000117631 309 ntBASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Gm14928-201ENSMUST00000120198 477 ntBASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Mir6392-201ENSMUST00000184924 108 ntBASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Tac1-203ENSMUST00000184986 691 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhb20Q91XZ9 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms