Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb3Q91XZ7 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Gm15693-201ENSMUST00000120470 637 ntBASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Mir7023-201ENSMUST00000185093 64 ntBASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Gm37230-201ENSMUST00000194491 818 ntBASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Gm45610-201ENSMUST00000209227 784 ntBASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb3Q91XZ7 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Gm9824-201ENSMUST00000178707 561 ntBASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Gm44387-201ENSMUST00000196298 145 ntBASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb3Q91XZ7 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms