Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgc5Q91XW9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhgc5Q91XW9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhgc5Q91XW9 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhgc5Q91XW9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgc5Q91XW9 Gm10728-201ENSMUST00000194292 1829 ntBASIC15.21■□□□□ 0.03
Pcdhgc5Q91XW9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgc5Q91XW9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhgc5Q91XW9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC15.21■□□□□ 0.02
Pcdhgc5Q91XW9 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhgc5Q91XW9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhgc5Q91XW9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhgc5Q91XW9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Pcdhgc5Q91XW9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhgc5Q91XW9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhgc5Q91XW9 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgc5Q91XW9 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Gm42480-201ENSMUST00000198434 2595 ntBASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Gm27501-201ENSMUST00000183599 107 ntBASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.19■□□□□ 0.02
Pcdhgc5Q91XW9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Gm12203-201ENSMUST00000118235 598 ntBASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Gm12209-201ENSMUST00000120089 596 ntBASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Gm1335-201ENSMUST00000121653 386 ntBASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Pcdhgc5Q91XW9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms