Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.18□□□□□ -0.14
TraipQ8VIG6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Gm16479-201ENSMUST00000121706 932 ntBASIC14.18□□□□□ -0.14
TraipQ8VIG6 Mir7221-201ENSMUST00000184009 72 ntBASIC14.18□□□□□ -0.14
TraipQ8VIG6 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.18□□□□□ -0.14
TraipQ8VIG6 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.18□□□□□ -0.14
TraipQ8VIG6 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.18□□□□□ -0.14
TraipQ8VIG6 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.18□□□□□ -0.14
TraipQ8VIG6 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.18□□□□□ -0.14
TraipQ8VIG6 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TraipQ8VIG6 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.17□□□□□ -0.14
TraipQ8VIG6 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Mir686-201ENSMUST00000102174 109 ntBASIC14.17□□□□□ -0.14
TraipQ8VIG6 Mir1247-201ENSMUST00000116706 82 ntBASIC14.17□□□□□ -0.14
TraipQ8VIG6 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.17□□□□□ -0.14
TraipQ8VIG6 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TraipQ8VIG6 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Gm45880-201ENSMUST00000213041 853 ntBASIC14.16□□□□□ -0.14
TraipQ8VIG6 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.16□□□□□ -0.14
TraipQ8VIG6 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 AC154849.3-201ENSMUST00000223733 1660 ntBASIC14.16□□□□□ -0.14
TraipQ8VIG6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
TraipQ8VIG6 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TraipQ8VIG6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms