Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh18Q8VHR0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Gm5566-201ENSMUST00000116118 459 ntBASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Gm2756-201ENSMUST00000195851 400 ntBASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Mir125a-201ENSMUST00000083545 68 ntBASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh18Q8VHR0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Gm9719-201ENSMUST00000162765 543 ntBASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Gm18766-201ENSMUST00000189811 808 ntBASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh18Q8VHR0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh18Q8VHR0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh18Q8VHR0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh18Q8VHR0 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.86□□□□□ -0.35
Pcdh18Q8VHR0 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh18Q8VHR0 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh18Q8VHR0 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh18Q8VHR0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh18Q8VHR0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh18Q8VHR0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pcdh18Q8VHR0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh18Q8VHR0 Gm22065-201ENSMUST00000103753 110 ntBASIC12.86□□□□□ -0.35
Pcdh18Q8VHR0 Gm22066-201ENSMUST00000103761 110 ntBASIC12.86□□□□□ -0.35
Pcdh18Q8VHR0 Gm24932-201ENSMUST00000103763 110 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms