Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Gm44401-201ENSMUST00000204462 2375 ntBASIC16■□□□□ 0.15
Ccdc9Q8VC31 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16■□□□□ 0.15
Ccdc9Q8VC31 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ccdc9Q8VC31 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Gm13464-201ENSMUST00000119418 935 ntBASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Gm15173-201ENSMUST00000122049 433 ntBASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Gm10499-201ENSMUST00000174094 934 ntBASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc9Q8VC31 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Gm5682-201ENSMUST00000173402 505 ntBASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Gm9682-201ENSMUST00000197505 556 ntBASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Gm44719-201ENSMUST00000206404 149 ntBASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Ccdc9Q8VC31 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms