Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp33Q8R5K2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Usp33Q8R5K2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Usp33Q8R5K2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Usp33Q8R5K2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Usp33Q8R5K2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Usp33Q8R5K2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.33■□□□□ 0.04
Usp33Q8R5K2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Gm20482-202ENSMUST00000174729 825 ntBASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Mir3547-201ENSMUST00000175461 88 ntBASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Gm44069-201ENSMUST00000204898 506 ntBASIC15.33■□□□□ 0.04
Usp33Q8R5K2 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usp33Q8R5K2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Gm16479-201ENSMUST00000121706 932 ntBASIC15.32■□□□□ 0.04
Usp33Q8R5K2 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Rubie-203ENSMUST00000227803 2430 ntBASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp33Q8R5K2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Usp33Q8R5K2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp33Q8R5K2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Usp33Q8R5K2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Usp33Q8R5K2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp33Q8R5K2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp33Q8R5K2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp33Q8R5K2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Usp33Q8R5K2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp33Q8R5K2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp33Q8R5K2 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp33Q8R5K2 Gm26185-201ENSMUST00000157692 266 ntBASIC15.31■□□□□ 0.04
Usp33Q8R5K2 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Usp33Q8R5K2 Mospd4-201ENSMUST00000180618 576 ntBASIC15.31■□□□□ 0.04
Usp33Q8R5K2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp33Q8R5K2 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp33Q8R5K2 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC15.31■□□□□ 0.04
Usp33Q8R5K2 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.31■□□□□ 0.04
Usp33Q8R5K2 Gm7046-201ENSMUST00000221351 977 ntBASIC15.31■□□□□ 0.04
Usp33Q8R5K2 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp33Q8R5K2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms