Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdt1Q8R4E9 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdt1Q8R4E9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdt1Q8R4E9 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdt1Q8R4E9 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdt1Q8R4E9 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.95□□□□□ -0.34
Cdt1Q8R4E9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdt1Q8R4E9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdt1Q8R4E9 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdt1Q8R4E9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdt1Q8R4E9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdt1Q8R4E9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdt1Q8R4E9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdt1Q8R4E9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdt1Q8R4E9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Gm27847-201ENSMUST00000183711 107 ntBASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Gm27375-201ENSMUST00000183799 107 ntBASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Gm27772-201ENSMUST00000184900 187 ntBASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Gm43094-201ENSMUST00000196549 921 ntBASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Gm43179-201ENSMUST00000198797 275 ntBASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdt1Q8R4E9 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.92□□□□□ -0.34
Cdt1Q8R4E9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms