Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd3Q8R1N4 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Gm24420-201ENSMUST00000176676 59 ntBASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd3Q8R1N4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Gm4804-201ENSMUST00000182234 999 ntBASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd3Q8R1N4 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Gm6912-201ENSMUST00000117218 544 ntBASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd3Q8R1N4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms