Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Gm6222-201ENSMUST00000120787 396 ntBASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf4Q8K4J2 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Gm1401-201ENSMUST00000122048 772 ntBASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Mir7221-201ENSMUST00000184009 72 ntBASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Gm45841-201ENSMUST00000207700 164 ntBASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf4Q8K4J2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf4Q8K4J2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms